 alff | Use ALFF method to compute the brain and return a ALFF brain map which reflects the "energy" of the voxels' BOLD signal |
| alff_gui | ALFF GUI by Xiaowei Song |
| f_alff | Use fALFF method to compute the brain and return a fALFF brain map. |
| f_alff_gui | ALFF GUI by Xiaowei Song |
| fc | Functional connectivity |
| fc_gui | Functional Connectivity GUI by Xiaowei Song |
| reho | Calculate regional homogeneity (i.e. ReHo) from the 3D EPI images. |
| reho_gui | Regional homogenius GUI by Xiaowei Song |
| rest | RESTing state fMRI data analysis toolkit by Xiao-Wei Song |
| rest_ChangeOrigin | Change the orgin of ANALYZE 7.5 |
| rest_ChangeOrigin_Recursive | Recursive change ANALYZE 7.5 Format's Origin |
| rest_Corr2FisherZ | Fisher Z score transformation |
| rest_DivideMeanWithinMask | Compute the mean within the mask and divide ReHo brain by the mean |
| rest_ROIList_gui | List ROI definition list and edit for REST's functional connectivity by Xiao-Wei Song |
| rest_ReadAnalyzeImage | Read file(ANALYZE 7.5, ...) for REST by Yong He and Xiao-Wei Song |
| rest_ReadLutColorScheme | Read look up table of color scheme By Xiao-Wei Song according to MRIcro's help forum |
| rest_ReadNiftiImage | Read file(NIFTI, ...) for REST by CHEN Gui-Wen and YAN Chao-Gan |
| rest_RecursiveDir | Recursive do with Dir and all its sub-folders by Xiao-Wei Song |
| rest_SetROI | Define ROI wizard by Xiao-Wei Song |
| rest_SphereROI | Define a ROI ball %Dawnwei.Song @ gmail.com % 20070830 |
| rest_WriteAnalyzeImage | Write ANALYZE 7.5 file by Yong He and Xiao-Wei Song |
| rest_WriteNiftiImage | Write file(NIFTI, ...) for REST by CHEN Gui-Wen and YAN Chao-Gan |
| rest_bandpass | Ideal Band pass filter for REST by Xiao-Wei Song |
| rest_detrend | Removing the linear trend for REST by Xiao-Wei Song |
| rest_loadmask | Load mask for REST by Xiao-Wei Song |
| rest_misc | Misc functions set for REST |
| rest_mni2tal | Converts coordinates from MNI brain to best guess |
| rest_nextpow2_one35 | Compute the min length for FFT according to AFNI's algorithm, By Xiao-Wei Song |
| rest_powerspectrum | Visualize the Power Spectrum and the Time course of user specified voxel whose coordinates could be set with SliceViewer By Xiao-Wei Song |
| rest_progress | Show a progress bar for REST by Xiao-Wei Song |
| rest_readfile | Read file(ANALYZE 7.5, NIFTI, ...) for REST by YAN Chao-Gan |
| rest_sliceviewer | Show a brain's slice. "rest_sliceviewer" can be opened more than one instance like MRIcro, and supports multi-slice, overlay and so on. by Xiao-Wei Song |
| rest_spm_matrix | returns an affine transformation matrix |
| rest_tal2mni | Converts coordinates to MNI brain best guess |
| rest_to4d | Build a 4D matrix for REST from series of Brain's volume/(time point). By Xiao-Wei Song |
| rest_waitbar | Parent and child waitbar for REST, by Xiao-Wei Song |
| rest_writefile | Write ANALYZE 7.5 or NIFTI file by YAN Chao-Gan |
Master index