Resting-state fMRI topics

DPARSFA报错,找不到Mask?

各位老师好:
    我在用DPARSFA处理一批数据,预处理选择了时间校正、头动校正、去除协变量、空间标准化。(网站的上传图片功能有问题,截图传不上来)。报错代码如下:

Realign Setup:PatientClass3Sub4403 OK

------------------------------------------------------------------------
Running job #1
------------------------------------------------------------------------
Running 'Realign: Estimate & Reslice'
Done    'Realign: Estimate & Reslice'
Done

Moving Head Motion Corrected Files:PatientClass3Sub4403 OK...(省略若干OK)...Moving Head Motion Corrected Files:NormalClass1Sub0601 OK

ROI-wise Functional Connectivity in REST

 Hi, I just finished running a functional connectivity analysis using the REST toolbox. I am looking at the FC between 2 regions so I entered those as ROIs and chose ROI-wise analysis.

The output is a series of txt files and I am wondering what exactly the numbers in the txt files represent? I am guessing that:

mask制作问题

老师们,好。

近期看到一篇文章: Resting-state functional connectivity patterns predict Chinese word reading competency. PloS one, 7(9), e44848
里面提及的mask制作,此文是这样说:
The  RSFC  analysis  was  performed  using  the  Resting-State fMRI Data Analysis Toolkit (REST) [25]. We conducted RSFC

Mask does not match?

向各位老师请教一个问题啊:

         用DPARSF_V2.2_130309 处理数据,在进行了slice timing;realign;Reorient Fun;Reorient T1;T1 coreg to Fun;New segment+DARTEL;Normalize 之后,准备进行接下来的步骤:Nuisance Covariates Regression;Warp Masks into individual Space等

Reorienting matrices for online data

 Given the amount of time and effort for interactive reorienting, here we release the reorient matrices for online data of Autism Brain Imaging Data Exchange (ABIDE) (Di Martino et al., 2013) (fcon_1000.projects.nitrc.org/indi/abide/). Please download and unzip the file, and then put the “DownloadedReorientMats” under your working directory.