Most recent paper

Topology Assisted Clustering of Temporal fMRI Brain Networks With Use-Case in Mitigating Non-Neural Multi-Site Variability

Mon, 01/12/2026 - 19:00

IEEE Access. 2025;13:172259-172278. doi: 10.1109/access.2025.3616256. Epub 2025 Sep 30.

ABSTRACT

Using temporal analysis of fMRI (functional Magnetic Resonance Imaging) data, we can characterize dynamic changes in brain connectivity over time. However, dynamic temporal analysis of fMRI data is challenging due to the high dimensionality of the datasets. Another fundamental challenge of dynamic temporal analysis of fMRI is the presence of non-neural artifacts that add sources of variation in the data that are not directly related to brain activity. For example, when data are acquired at different scanners at different temporal sampling rates and later analyzed as a single dataset, we have to contend with different number of image snapshots for different subjects. Also, high-frequency scans lead to more fine-grained temporal snapshotting than low-frequency scans. These factors can obscure true neural signals and lead to inconsistent characterization of dynamic brain connectivity across scans. Existing graph-based solutions often struggle with parameter sensitivity, since their outcomes depend heavily on selecting an arbitrary correlation threshold for defining network edges. In contrast, topological data analysis (TDA) sweeps across all threshold values to track the persistence of connectivity features, making it more robust for capturing fine-grained temporal dynamics. Clustering methods become imperative in this context as they offer a powerful means to uncover underlying structures within the high-dimensional temporal data. We address these challenges by developing a topological data analysis based temporal clustering pipeline targeted for dynamic functional connectivity derived from fMRI datasets that can preserve the dynamics of the temporal datasets and mask out the non-neural variability induced by varying sampling rates. The TDA-based pipeline extracts robust features that are invariant to non-neural noise and uses them to perform temporal clustering. We evaluate our framework by performing temporal clustering of resting-state fMRI-derived dynamic functional connectivity brain networks obtained from 316 subjects, each of whom was scanned thrice using different temporal sampling periods. The efficacy of our TDA-based pipeline is compared against three alternative approaches: direct time-series clustering, PCA-based dimensionality reduction and clustering, and a traditional fully connected network analysis pipeline with MDS-based dimensionality reduction. Additionally, we demonstrate that for a majority of cases, the number of clusters remains consistent for the same subjects scanned at different temporal sampling rates- showcasing the greater robustness of our TDA-based pipeline compared to other pipelines. The TDA pipeline achieved higher overlaps (59 %) in optimal cluster numbers across sampling cohorts, as well as higher pairwise similarity (74-77 %) between subjects' cluster solutions. This indicates that incorporating network topology via TDA enables more robust clustering of temporal fMRI datasets despite changes in sampling rates.Furthermore, we validate our method on a clinical dataset (ADHD-200). The TDA-based pipeline successfully captures consistent clustering patterns across different sites and scanning protocols, with higher stability of cluster assignments (> 80% similarity) and better separation of subject-level dynamics compared to existing approaches. This reinforces the method's robustness in multisite, multi-condition settings. Our results demonstrate that incorporating network topology via TDA significantly enhances the reliability of temporal clustering in fMRI studies, offering a robust framework for studying brain dynamics across heterogeneous acquisition settings.

PMID:41522212 | PMC:PMC12788382 | DOI:10.1109/access.2025.3616256

Biomarkers

Mon, 01/12/2026 - 19:00

Alzheimers Dement. 2025 Dec;21 Suppl 2:e107257. doi: 10.1002/alz70856_107257.

ABSTRACT

BACKGROUND: Brainstem nuclei such as the locus coeruleus (LC) are amongst the earliest regions affected by tau pathology in Alzheimer's disease (AD). The LC's extensive noradrenergic projections shape brain network architecture and its structural integrity is associated with resilience against cognitive decline. However, the role of LC network connectivity in cognitive resilience remains unclear, as does its potential differential impact across distinct population subgroups who might specifically benefit from its augmentation.

METHODS: We included 393 cognitively unimpaired Aβ+ individuals (centiloid > 19) from the A4 study who underwent baseline resting-state fMRI and florbetapir Aβ-PET as well as longitudinal Preclinical Alzheimer's Cognitive Composite (PACC) assessment. Pearsons's correlation coefficient was used to create maps of LC functional connectivity (LC-FC) to 454 parcels of the Schaefer-Tian parcellation which were harmonised across scanners using NeuroCombat. Mixed-effects models with natural cubic splines (2 DOF) were used to test whether global, Yeo17 network, and individual parcel level LC-FC moderated PACC decline over time as well as in interaction with centiloid, sex, and APOΕ4 status, controlling for age, education, framewise displacement, treatment, and sex (when not interacted). Analyses were deemed significant following Benjamini-Hochberg false-discovery rate correction for multiple comparisons.

RESULTS: The LC showed widespread connectivity that was strongest within the limbic regions, hippocampus, and thalamus (Figure 1a). Greater global LC-FC was associated with attenuated cognitive decline (Figure 1b, p = 0.014), especially at higher levels of Aβ (Figure 1c, p <0.001). At the network level, LC-FC resilience was predominantly related to task-positive (control and dorsal/ventral attentional) networks, whilst in the default mode network greater LC-FC was associated with reduced cognitive decline at lower Aβ (Figure 1b/c). The effect of LC-FC on PACC decline was particularly pronounced in females at high Aβ levels (Figure 2b) and APOE-e4 carriers (Figure 2c), demonstrating a synergistic effect of sex and genetic risk on LC-mediated cognitive resilience (Figure 2d).

CONCLUSIONS: Our findings further support the role of the LC in cognitive resilience and suggest this particularly manifests from modulation of task-positive attentional and frontoparietal control networks. Moreover, female e4-carriers exhibit more pronounced attenuation of cognitive decline, suggesting they may especially benefit from augmentation of noradrenergic function.

PMID:41521485 | DOI:10.1002/alz70856_107257

Impact of meningioma and glioma on whole-brain dynamics

Sun, 01/11/2026 - 19:00

Sci Rep. 2026 Jan 11. doi: 10.1038/s41598-026-35140-1. Online ahead of print.

ABSTRACT

Brain tumors, particularly meningiomas and gliomas, can profoundly affect neural function, yet their impact on brain dynamics remains incompletely understood. This study investigates alterations in normal brain function among meningioma and glioma patients by assessing dynamical complexity through the Intrinsic Ignition Framework. We analyzed resting-state fMRI data from 34 participants to quantify brain dynamics using intrinsic ignition and metastability metrics. Our results revealed distinct patterns of disruption: glioma patients showed significant reductions in both metrics compared to controls, indicating widespread network disturbances. In contrast, meningioma patients exhibited significant changes predominantly in regions with substantial tumor involvement. Resting-state network analysis demonstrated strong metastability and metastability/ignition correlations between regions in controls, which were slightly weakened in meningioma patients and severely disrupted in glioma patients. These findings highlight the differential impacts of gliomas and meningiomas on brain function, offering insights into their distinct pathophysiological mechanisms. Furthermore, these results show that brain dynamics metrics can be effective biomarkers for identifying disruptions in brain information transmission caused by tumors.

PMID:41521239 | DOI:10.1038/s41598-026-35140-1

The effect of prolonged glucose infusion on resting-state fMRI signal fluctuations at 7 T

Sun, 01/11/2026 - 19:00

Magn Reson Imaging. 2026 Jan 9:110611. doi: 10.1016/j.mri.2026.110611. Online ahead of print.

ABSTRACT

The aim of this study was to examine the effect of 2-h glucose infusion after an overnight fast on relative resting-state fMRI signal fluctuations. Our hypothesis was that neuronal glucose metabolism would be affected, and that this would lead to changes in signal power at specific frequency bands. Resting state fMRI (rsfMRI) scans were acquired in 9 subjects pre- and post-glucose ~2 h infusion. Fourier spectral analysis was performed using signals localized in the prefrontal cortex. Power spectra were calculated and statistical analysis was performed targeting the full spectral range using both a cluster-based and Wilcoxon signed rank test. For both tests, post-infusion signal power was significantly higher between the 0.015-0.1 Hz range. Moreover we observed differences at higher frequencies, normally attributed to cardiac or respiratory related signals. Our findings suggest that prolonged glucose infusion post-fasting may significantly modulate rsfMRI signal fluctuations in the prefrontal cortex that may be related to metabolic responses to glucose infusion. Future studies should investigate the dynamic effects of sustained glucose infusion using continuous fMRI, exploring implications for brain function and metabolic disorders like diabetes.

PMID:41520930 | DOI:10.1016/j.mri.2026.110611

Altered brain dynamic in cirrhotic patients without overt hepatic encephalopathy: state and trait features

Sun, 01/11/2026 - 19:00

Brain Res Bull. 2026 Jan 9:111724. doi: 10.1016/j.brainresbull.2026.111724. Online ahead of print.

ABSTRACT

Neurocognitive impairment, a prevalent complication in cirrhosis, correlates with disruptions in static functional connectivity(FC) of the brain. This study aims to explore altered spatiotemporal properties of blood oxygen-level dependent(BOLD) signals and elucidate their association with neurocognitive changes in cirrhotic patients. Between March 2023 and February 2025, we recruited 77 cirrhotic patients and 66 healthy controls(HCs) accompanied by resting-state functional magnetic resonance imaging(rs-fMRI) acquisition. Neurocognitive function was evaluated by psychometric hepatic encephalopathy score(PHES). The hidden Markov model(HMM) was used to explain variations in rs-fMRI averaged functional activity(AFA) and FC across the whole-brain by using a set of 5 unique recurring states. This study assessed the stability between different groups by comparing the time spent in each state and the mean duration of visits to each state. MannWhitney U tests, Kruskal Wallis H test, chi-squared test, correlation analysis. After Bonferroni correction, cirrhotic patients with minimal hepatic encephalopathy(MHE) showed significantly higher temporal stability and proportional time spent in state#1 characterized by lower AFA of frontoparietal network(FPN) and subcortical network and higher AFA of visual network (VN), as well as have lower fractional occupancy(FO) and averaged lifetime(ALT) in state#5, which is characterized by weaker within-network FC and lower AFA of limbic network(LN), salience network(SN), somatosensory motor network(SMN), and default mode network(DMN). We observed a significant positive correlation(Bonferroni corrected) between dynamic properties in state#5 and PHES performance. These findings suggest that disrupted brain functional synchrony across time is present in MHE and is linked to cognitive impairment.

PMID:41520895 | DOI:10.1016/j.brainresbull.2026.111724

Functional Magnetic Resonance Imaging of Frontotemporal Dual-Site Repetitive Transcranial Magnetic Stimulation in Subjective Tinnitus

Sun, 01/11/2026 - 19:00

Neurochem Int. 2026 Jan 9:106110. doi: 10.1016/j.neuint.2026.106110. Online ahead of print.

ABSTRACT

OBJECTIVE: This study investigated the neurofunctional effects of frontotemporal dual-site repetitive transcranial magnetic stimulation (rTMS) in patients with subjective tinnitus (ST).

METHODS: Ninety ST patients were randomly assigned to active (n=45) or sham (n=45) with rTMS. Fifty-two healthy subjects served as controls. All underwent resting-state fMRI (rs-fMRI) and clinical assessment (Tinnitus Handicap Inventory, THI) before and after a two-week intervention. Brain metrics included regional homogeneity (ReHo), fractional amplitude of low-frequency fluctuations (fALFF), degree centrality (DC), functional connectivity (FC), and structural covariance networks (SCN).

RESULTS: Active rTMS significantly reduced THI scores (P < 0.001). Rs-fMRI showed decreased ReHo in the right inferior parietal lobule, decreased fALFF in the right superior temporal gyrus (STG), but increased fALFF in the right temporal pole, and reduced DC in the right middle temporal gyrus (MTG) (all P < 0.05). FC weakened between right STG-MTG and right MTG-occipital gyrus (P < 0.05). SCN nodal centrality changed in right STG and left MTG (P < 0.05). No such changes were seen in sham or control groups (all P > 0.05).

CONCLUSION: Frontotemporal dual-site rTMS alleviates tinnitus, likely by modulating activity and connectivity in auditory and cross-modal integration regions, involving the default mode and auditory-visual processing networks.

PMID:41520884 | DOI:10.1016/j.neuint.2026.106110

Modulatory effects of genetic vs. pharmacological HCN4 channel inhibition on stimuli transmission during acute pain

Sun, 01/11/2026 - 19:00

Neuroscience. 2026 Jan 9:S0306-4522(26)00017-5. doi: 10.1016/j.neuroscience.2026.01.011. Online ahead of print.

ABSTRACT

Acute pain processing emerges from complex interactions among multiple brain regions, with local ion channels critically shaping neuronal communication. To better understand the role of HCN4 channels during acute pain in mice, a genetic brain-specific HCN4-KO was compared with pharmacological inhibition by the selective HCN4 channel blocker EC18. Stimulus-driven BOLD-fMRI measurements using graded peripheral thermal stimulation allowed brain-wide investigation of both discriminative and suppressive processes within ascending and descending pain pathways. Classical BOLD parameters and graph-theoretical analyses revealed that compared to controls, HCN4-KO showed a significant increase in brain activity in regions responsible for discriminative tasks, emotional pain processing and pain suppression including sensory cortex, amygdala and hypothalamus across both high and low thermal stimulation intensities. In striking contrast, acute inhibition of HCN4 with EC18 decreased activity in these same regions compared with both KO and control mice. Furthermore, comparing pre- and post-stimulation resting-state measurements revealed that HCN4-KO and controls exhibited a stimulation-induced increase in functional connectivity, whereas EC18-treated mice demonstrated a connectivity decrease. Taken together, genetic loss of HCN4 produced a hypersensitive phenotype in thermal pain processing, whereas acute pharmacological inhibition of the channel elicited an opposing hyposensitive phenotype.

PMID:41520869 | DOI:10.1016/j.neuroscience.2026.01.011

Biomarkers

Sun, 01/11/2026 - 19:00

Alzheimers Dement. 2025 Dec;21 Suppl 2:e107430. doi: 10.1002/alz70856_107430.

ABSTRACT

BACKGROUND: Alzheimer's disease (AD) is a highly heterogeneous condition both in terms of the distribution of pathology deposition and clinical manifestation. The organization of functional brain networks is related to AD pathology, with recent work showing that higher dementia severity is related to the desegregation of brain networks (Zhang et al., 2023). However, the spatiotemporal heterogeneity of these changes in network segregation and how they contribute to different cognitive deficit profiles remains an open area of research. To contribute to this question, we applied a clustering-based data-driven disease progression model to system-level measures of network organization.

METHOD: We included 754 resting-state functional magnetic resonance imaging (fMRI) scans from cognitively impaired individuals (CDR > 0) enrolled in the Alzheimer's Disease Neuroimaging Initiative. The correlations of fMRI resting-state time series between nodes were used to construct brain networks (Chan et al., 2014). Nodes were assigned to a functional system based on a previously defined functional atlas (Power et al., 2011). Network segregation was calculated for each brain system as measures of system-level organization. The SuStaIn algorithm was used to simultaneously stage and subtype subjects according to their patterns of network segregation (Young et al., 2018). Functional systems that were clustered together were further analyzed collectively using linear regression models.

RESULT: SuStaIn identified two subtypes of alterations in system-level network segregation, which were upheld in k-fold cross validation. One cluster showed decreases in the segregation of sensory-motor systems and several additional systems, including the superior temporal gyrus, salience, and medial temporal parietal systems. The other cluster showed decreases primarily in segregation of association systems including the default mode network, task control systems, attention systems, and memory retrieval systems. Further, we observed a significant interaction effect between system-type and model-estimated disease stage and subtype.

CONCLUSION: Resting-state fMRI signals can be used to identify dissociable patterns of AD-related brain network desegregation relating to different profiles of brain network dysfunction and cognitive impairment. These findings begin to describe the spatiotemporal heterogeneity in brain network decline, and their relation to cognitive trajectories, which is relevant not only to AD prognostics but also evaluating clinical trial outcomes in cognitively-diverse patient populations.

PMID:41520286 | DOI:10.1002/alz70856_107430

Low-intensity transcranial ultrasound effects on the ventral intermediate nucleus and zona incerta in Parkinson's disease tremor

Sat, 01/10/2026 - 19:00

Brain Stimul. 2026 Jan 8:103025. doi: 10.1016/j.brs.2026.103025. Online ahead of print.

ABSTRACT

BACKGROUND: Tremor in Parkinson's disease (PD) is a disabling symptom that often persists despite pharmacological treatment. High-intensity focused ultrasound (HIFU) targeting the ventral intermediate nucleus (VIM) alleviates Essential Tremor, but recent evidence suggests the zona incerta (ZI) may be a superior target for Parkinsonian tremor. This study compared the effects of transcranial ultrasound stimulation (TUS) to the VIM and ZI on postural and rest tremor, and examined related neural correlates using resting-state fMRI (rs-fMRI).

METHODS: In this within-subject, crossover study, 19 participants with PD and right-hand tremor received both left VIM- and ZI-TUS on the same day in randomized order, separated by a four-hour washout period. Tremor severity and rs-fMRI data were collected before and after each session. Normalized changes in tremor intensity, resting-state functional connectivity (Δrs-FC), and fractional amplitude of low-frequency fluctuations (ΔfALFF) within the cerebello-thalamo-cortical network were analysed.

RESULTS: TUS effects differed by target and tremor type. VIM-TUS significantly reduced postural tremor (p < 0.001) but not rest tremor, whereas ZI-TUS improved both postural (p = 0.005) and rest (p = 0.005) tremor. Although no overall group-level rs-FC changes were observed, individual Δrs-FC of the ZI following ZI-TUS correlated with tremor improvement (postural: r = 0.762, p < 0.001; rest: r = 0.586, p = 0.008), with similar findings for ΔfALFF.

CONCLUSION: ZI-TUS modulates tremor more robustly than VIM-TUS, suggesting that ZI may be a promising target for treatment of Parkinsonian tremor.

PMID:41519465 | DOI:10.1016/j.brs.2026.103025

The Impact of Sleep Deprivation on Dynamic Functional Connectivity of the Brain: Based on Alertness Task Performance

Sat, 01/10/2026 - 19:00

Brain Res Bull. 2026 Jan 8:111712. doi: 10.1016/j.brainresbull.2025.111712. Online ahead of print.

ABSTRACT

Sleep deprivation (SD) impairs mood and cognition, yet its dynamic neural mechanisms remain unclear. Forty healthy adults (30-h SD) completed mood assessments, resting-state fMRI (rs-fMRI), and psychomotor vigilance task (PVT) tests at baseline and post-SD. Using dynamic functional connectivity (dFC) with sliding windows and k-means clustering, we identified two recurrent whole-brain states: (i) an economical state with sparse, weaker global coupling and (ii) a maladaptive compensatory state with globally strengthened synchronization. SD increased both the fraction of windows and mean dwell time (MDT) of the maladaptive state. Across participants, PVT lapses correlated positively with the maladaptive state's MDT and fraction of windows and negatively with those of the economical state. Finally, we built an interpretable predictive model of PVT lapses using competitive adaptive reweighted sampling partial least-squares regression (CARS-PLSR), which highlighted connections within the dorsal attention network (DAN) as key predictors. These findings link behavioral impairment to altered brain-state dynamics and provide a sparse, testable feature set that can support early risk stratification and intervention for SD-related cognitive decline.

PMID:41519179 | DOI:10.1016/j.brainresbull.2025.111712

White matter structure-function decoupling in juvenile myoclonic epilepsy

Sat, 01/10/2026 - 19:00

Neuroimage Clin. 2026 Jan 6;49:103945. doi: 10.1016/j.nicl.2026.103945. Online ahead of print.

ABSTRACT

OBJECTIVE: Accumulating evidence highlights both structural and functional brain alterations in juvenile myoclonic epilepsy (JME), yet how these structural changes within white matter pathways drive functional disorganization remains largely unknown. Here, we aim to investigate white matter structure-function coupling (SFC) in treatment-naïve, newly diagnosed JME.

METHODS: Forty-seven patients with JME and 40 demographically matched healthy controls underwent diffusion-weighted imaging (DWI) and resting-state functional magnetic resonance imaging (fMRI). Tract-wise SFC was assessed using a multivariate linear regression, with the amplitude of low-frequency fluctuations as the dependent variable and four microstructural metrics-fractional anisotropy (FA), mean diffusivity (MD), axial diffusivity (AD), and radial diffusivity (RD)-as independent variables. A support vector regression with five-fold cross-validation was employed to establish the associations with clinical severity.

RESULTS: JME patients exhibited widespread white matter microstructural alterations, including increased FA and decreased diffusivity metrics, alongside functional hyperactivity in multiple tracts. Notably, a significant reduction of SFC was observed in the left corticospinal tract (P = 0.008) and left inferior longitudinal fasciculus (P = 0.006). In addition, multimodal models combining structural, functional, and coupling metrics demonstrated superior predictive performance for clinical severity compared to single-modal analyses (P = 0.026).

CONCLUSION: These findings highlight white matter structure-function decoupling in the early stages of JME, specifically in key pathways relevant to motor and cognitive dysfunctions. Furthermore, the tract-specific SFC investigation offers a useful way for diagnosis, prognosis, and guiding personalized treatment strategies in this complex epilepsy syndrome.

PMID:41519070 | DOI:10.1016/j.nicl.2026.103945

Biomarkers

Sat, 01/10/2026 - 19:00

Alzheimers Dement. 2025 Dec;21 Suppl 2:e107508. doi: 10.1002/alz70856_107508.

ABSTRACT

BACKGROUND: Type 2 diabetes mellitus is a risk factor for incident dementia including Alzheimer's disease (AD) dementia, but the mechanism is not clear. Abnormalities in brain default mode network (DMN) connectivity are associated both with T2DM and with increased risk for AD dementia. We explore the response of the DMN to acute glucose ingestion in diabetic versus non-diabetic older adults to better understand the brain's neurovascular response to glucose and ultimately relate that response to longitudinal cognitive and brain changes.

METHOD: We scanned (3T Siemens Prisma MRI) N = 59 cognitively unimpaired older (50-65 years) adults (N = 26 with T2DM, N = 33 non-diabetic). Each received a fasting resting-state functional MRI (rs-fMRI) scan, a 75g glucose tolerance test, a two-hour break and then a post-glucose rsfMRI scan. Rs-fMRI analyses were performed using FSL software with a posterior cingulate cortex/precuneus seed to identify the DMN in each participant. First, we investigated individual participant differences in DMN connectivity between fasting and 120 minutes post-glucose states to evaluate where each participant had more or less DMN connectivity post-glucose than while fasting. We then compared those individual differences in the brains' response to glucose within and between diabetic and non-diabetic groups. All analyses were adjusted for age and sex. We corrected for voxel-wise multiple comparisons (cluster-wise threshold z>3.1; corrected p-threshold = 0.001).

RESULT: We found significant differences between diabetic and non-diabetic participants in the brains' response to glucose ingestion broadly throughout the brain (Figure 1). Within-group analyses provided context for those differences. In diabetic participants, glucose ingestion caused an increase in DMN connectivity with the cerebellum and superior frontal gyrus but a decrease with parietal, occipital, and orbitofrontal regions. In contrast, in non-diabetic participants, glucose ingestion caused in increase in DMN connectivity with the lateral occipital cortex and middle temporal gyrus, but a decrease in connectivity with the cerebellum, medial prefrontal cortex, and anterior thalamus.

CONCLUSION: Our findings highlight distinct DMN connectivity responses to glucose ingestion in older adults with and without T2DM. Relating these differences to longitudinal brain and cognitive changes will help elucidate possible mechanisms and uses of rs-fMRI connectivity as a predictive biomarker.

PMID:41518670 | DOI:10.1002/alz70856_107508

Integrating functional network topology, synaptic density, and tau pathology to predict cognitive decline in amnestic mild cognitive impairment

Sat, 01/10/2026 - 19:00

J Neurol. 2026 Jan 10;273(1):76. doi: 10.1007/s00415-025-13613-z.

ABSTRACT

BACKGROUND: Amnestic mild cognitive impairment (aMCI) represents a prodromal stage of Alzheimer's disease and carries a high risk of progression to dementia. Disruptions in functional brain networks, synaptic degeneration, and tau pathology each serve as neural markers of cognitive decline in aMCI. In this study, we employed a multimodal neuroimaging approach to determine whether integrating these markers provides a more powerful explanation of cognitive deterioration than examining them individually.

METHODS: Twenty-eight aMCI patients and 24 healthy controls underwent cognitive assessment, resting-state fMRI, 11C-UCB-J PET (synaptic density), and 18F-MK-6240 PET (tau). Eighteen aMCI patients were reassessed after 2 years. Graph-theoretical measures of network topology were derived, and linear regression models were used to examine whether combining functional, synaptic, and tau markers improved prediction of cognitive decline in aMCI.

RESULTS: Longitudinal changes in right hippocampal characteristic path length, synaptic density, and tau accumulation jointly predicted decline in delayed memory recall, achieving a higher predictive performance (adjusted R2 = 0.753) than unimodal models (adjusted R2 range: - 0.009-0.421), with reduced overfitting degree.

CONCLUSIONS: Multimodal neuroimaging integrating functional network topology, synaptic density, and tau burden improves prediction of memory decline in aMCI. These findings highlight complementary neural processes underlying progression and support multimodal imaging as a valuable approach for monitoring in prodromal Alzheimer's disease.

PMID:41518411 | DOI:10.1007/s00415-025-13613-z

Sex Classification Based on the Functional Connectivity Patterns of the Language Network: A Resting State fMRI Study

Sat, 01/10/2026 - 19:00

Hum Brain Mapp. 2026 Jan;47(1):e70450. doi: 10.1002/hbm.70450.

ABSTRACT

Research on sex differences in the brain is essential for a better understanding of how the brain develops and ages, and how neurological and psychiatric conditions can impact men and women differently. While numerous studies have focused on sex differences in brain structures, few have examined the characteristics of functional networks, particularly the language network. Although previous research suggests similar overall language performance across sexes, differences may still exist in the brain networks that underlie language processing. In addition, prior studies on sex differences in language have predominantly relied on task-based fMRI, which may fail to capture subtle differences in underlying functional activity. In this study, we applied a machine learning approach to classify participants' sex based on resting-state functional connectivity patterns of the language network in healthy young adults (270 men and 288 women; age: 22-36 years), and to identify the most predictive functional connectivity features. The classifier achieved 91.3% accuracy, with key discriminant features anchored to the left opercular part of the inferior frontal gyrus, the left planum temporale, and the left anterior middle temporal gyrus. These regions show distinctive connectivity patterns with heteromodal association cortices, including the occipital poles, angular gyrus, posterior cingulate gyrus, and intraparietal sulcus. Although there was an overlap between men and women, men displayed stronger functional connectivity values in these regions. These findings highlight sex-related differences in functional connectivity patterns of the language network at rest, underscoring the importance of considering sex as a variable in future research on language and brain function.

PMID:41518149 | DOI:10.1002/hbm.70450

Disrupted Sensorimotor Network Integration in Women With Fibromyalgia Revealed by Resting-State Functional MRI

Sat, 01/10/2026 - 19:00

J Neuroimaging. 2026 Jan-Feb;36(1):e70118. doi: 10.1111/jon.70118.

ABSTRACT

BACKGROUND AND PURPOSE: Fibromyalgia (FM) is a chronic syndrome characterized by widespread musculoskeletal pain, hypersensitivity, and cognitive impairments. Alterations in brain functional connectivity have been suggested as possible mechanisms underlying pain amplification in these patients. This study aimed to investigate patterns of brain functional connectivity in patients with FM using resting-state functional magnetic resonance imaging.

METHODS: Data were obtained from the public OpenNeuro repository and acquired on a 3 Tesla scanner. The sample consisted of 33 women with a clinical diagnosis of FM (x̅ = 41.73 ± 6.09 years) and 33 age-matched healthy controls (x̅ = 41.52 ± 6.03 years), with no significant differences in age (p = 0.89) or education level (p = 0.81). Images were processed and analyzed using independent component analysis. Between-group comparisons were corrected for multiple comparisons using false discovery rate (FDR) correction (p < 0.05).

RESULTS: Patients with FM showed a significant reduction in functional connectivity within the right sensorimotor network (SMN) compared to controls (p-FDR < 0.05). Moreover, a negative correlation was observed between connectivity in this network and the sensory dimension of pain assessed by the McGill Pain Questionnaire (r = -0.35; p = 0.05).

CONCLUSION: The reduced functional connectivity within the SMN may represent a neurobiological marker of FM, reflecting dysfunctions in sensorimotor integration and central modulation of pain. These findings support the hypothesis that FM involves functional brain alterations related to pain perception and amplification.

PMID:41518021 | DOI:10.1111/jon.70118

Biomarkers

Fri, 01/09/2026 - 19:00

Alzheimers Dement. 2025 Dec;21 Suppl 2:e105624. doi: 10.1002/alz70856_105624.

ABSTRACT

BACKGROUND: Growing evidence indicates that the coexistence of visual and auditory impairments increases the risk of developing Alzheimer's disease (AD). However, the mechanisms through which these sensory deficits influence the progression of AD, particularly their impact on amyloid and tau pathology, remain unclear. We hypothesize that alterations in the audio-visual dynamic network play a critical role in mediating the spread of amyloid-related tau pathology during the early stages of AD.

METHOD: This study included multimodal imaging data, including functional MRI, [18F]NAV4694 amyloid-PET, and [18F]NAV4694 tau-PET, from the TRIAD cohort (n = 216, Table 1). Participants were classified as amyloid-beta (Aβ) positive (A+) or negative (A-) based on established global uptake values of [18F]NAV4694 (global standardized uptake value ratio [SUVR] > 1.55). Tau positivity (T+) or negativity (T-) was determined using [18F]MK6240, with a temporal meta-ROI SUVR threshold > 1.30. Tau staging was based upon Braak stage classification. Brain dynamics in resting-state fMRI data were analyzed with a multilayer modularity algorithm in MATLAB, focusing on primary sensory and higher-order networks.

RESULT: Module allegiance within the auditory network (AN) and visual networks (VN) was lower in the A+T+ group compared to the A-T- group. Additionally, flexibility within the frontoparietal network (FPN) was increased, while recruitment within the FPN and integration between AN and VN were reduced in the A+T+ group compared to A-T- group (Figure 1). Integration between AN and VN negatively correlated with [18F]MK6240 SUVR in Braak stage 1 through 5 and the temporal meta-ROI, as well as with neocortical [18F]NAV4694 SUVR. Furthermore, AN-VN integration mediated the relationship between neocortical [18F]NAV4694 SUVR and [18F]MK6240 SUVR in Braak stage 1 and 2 (Figure 2).

CONCLUSION: Our study suggests that audio-visual network integration during the early stages of tau pathology mediates amyloid-related tau accumulation. This supports a framework in which decline brain network integration may facilitates the early spread of amyloid-driven tau pathology across interconnected brain regions.

PMID:41513243 | DOI:10.1002/alz70856_105624

Biomarkers

Fri, 01/09/2026 - 19:00

Alzheimers Dement. 2025 Dec;21 Suppl 2:e107675. doi: 10.1002/alz70856_107675.

ABSTRACT

BACKGROUND: Disruptions in brain network connectivity are strongly associated with the progression of cognitive decline in the Alzheimer's disease (AD) continuum, including mild cognitive impairment (MCI). This study aimed to investigate the relationship between alterations in functional brain connectivity within the default mode network (DMN) in patients with MCI and plasma biomarker levels typically altered in AD (Aβ40, Aβ42, Tau, pTau-181, Aβ42/Aβ40, Aβ42/pTau, Aβ42/tTau, pTau/tTau).

METHODS: Eighteen patients (mean age = 65 years) diagnosed with MCI according to the 2018 NIA-AA and Alzheimer's Association criteria, based on medical and neuropsychological evaluation at the Hospital das Clínicas, University of Campinas (HC-UNICAMP), Brazil, were selected for blood collection and subsequent functional magnetic resonance imaging (fMRI) scans. Plasma samples were stored and analyzed using the automated SIMOA HD-X immunoassay system (Quanterix, Billerica, MA). Resting-state fMRI (RS-fMRI) data were acquired using a 3T Achieva-Intera PHILIPS® scanner. Both imaging data and correlation analyses were processed using the UF2C toolbox within MATLAB and SPM12, with results corrected for false discovery rate (FDR).

RESULTS: Two notable negative correlations were found between the right hippocampus and right precuneus and the Aβ42/Aβ40 ratio (Spearman's correlation: r = -0.76, p = 0.033). No significant correlations were observed for other plasma biomarkers after FDR correction.

CONCLUSION: Since network reorganization is a characteristic feature of MCI and AD, with regions exhibiting increased or decreased activity, the observed inverse relationship between Aβ42/Aβ40 and functional connectivity between the right hippocampus and right precuneus (indicating that an increase in Aβ42/Aβ40 is associated with decreased functional connectivity, and vice versa) supports the disease's underlying pathophysiology. This finding provides a potential avenue for research and diagnostic monitoring. Further studies are needed to explore the functional impact of these alterations and their relevance to disease progression.

PMID:41512461 | DOI:10.1002/alz70856_107675

The role of resting-state functional connectivity of locus coeruleus in attention decline after acute sleep deprivation

Fri, 01/09/2026 - 19:00

Sleep Med. 2026 Jan 7;139:108769. doi: 10.1016/j.sleep.2026.108769. Online ahead of print.

ABSTRACT

The locus coeruleus (LC) contains norepinephrine (NE)-synthesizing neurons that release NE throughout the brain and plays a critical role in maintaining arousal and attention. However, it remains unclear whether resting-state functional connectivity (FC) of the LC during rested wakefulness (RW) is related to attention decline following acute sleep deprivation (SD). In this study, thirty healthy participants with normal sleep patterns underwent resting-state functional magnetic resonance imaging (fMRI) before and after acute SD. Attention performance was assessed using the psychomotor vigilance task (PVT). Results showed that FC between the LC and the left caudal temporal thalamus significantly increased after SD, and LC-thalamus FC during RW was correlated with both attention performance and attention decline after acute SD. However, these LC-thalamus-attention associations were primarily observed when global signals regression (GSR) was applied during preprocessing. Furthermore, LC-derived FC patterns were associated with the distribution of the NE transporter from a public dataset. Sensitivity analyses indicated that the observed relationships between LC-thalamus FC and attention were dependent on the preprocessing choice of GSR, although similar effects were also observed in other thalamic subregions. Together, these pilot results suggest a potential LC-thalamus-attention mechanism associated with sleep loss and provide a testable framework for future studies with optimized LC imaging and analytical approaches.

PMID:41512349 | DOI:10.1016/j.sleep.2026.108769

Impact of Intranasal Administration of Ayurveda Medicine in Apparently Healthy Individuals on Neurophysiological Variables and Functional Connectivity Using Functional Magnetic Resonance Imaging: Protocol for an Exploratory Randomized Controlled Trial

Fri, 01/09/2026 - 19:00

JMIR Res Protoc. 2026 Jan 9;15:e67132. doi: 10.2196/67132.

ABSTRACT

BACKGROUND: Nasyakarma, an Ayurveda nasal drug delivery system, is considered a potent therapeutic modality in panchakarma treatment. Uniquely, nasal drug delivery can bypass liver metabolism and the blood-brain barrier for faster drug delivery. Available studies on nasya karma focus mainly on its efficacy. This pioneering study aims to explore the mechanisms of nasya karma on brain function and neurophysiology, investigating its potential to modulate activity in specific brain regions and affect the functional connectivity between these regions using functional magnetic resonance imaging (fMRI).

OBJECTIVE: The study aims to map the neurophysiological response of the brain to nasya karma using blood oxygen level-dependent fMRI in both rest and task phases and assess the impact of nasya karma on quality of life, cognition, sleep, and psychological well-being in healthy volunteers.

METHODS: A total of 60 healthy volunteers in the age group of 20 to 40 years who fulfill the selection criteria will be recruited for this randomized controlled trial at the National Ayurveda Institute for Panchakarma, Cheruthuruthy, Kerala, India, and randomized in a 1:1 ratio to either the intervention group (n=30; group 1, receiving nasya karma with anu taila, an oil-based formulation manufactured using a paste and decoction of herbal medicines with oils as the base material, for a period of 14 days) or the control group (n=30; group 2, not receiving any intervention). The participants will undergo task-based and resting fMRI on day 1 (twice on day 1 before administration and 15 minutes after nasya karma for participants in group 1) and day 14 to map the neurophysiological response to nasya karma of the brain. A comprehensive neuroimaging protocol using structural magnetic resonance imaging and fMRI will be used in the study. The effect of nasya karma on sleep, psychological well-being, cognition, and quality of life will be assessed on the 1st and 30th days in both groups.

RESULTS: After the data collection process of this randomized controlled trial is completed, the study will go into the analysis stage, in which the collected data will be subjected to robust statistical analysis. The final results of the study are expected to be published in 2026.

CONCLUSIONS: This study will investigate the neurophysiological mechanisms of nasya karma by examining clinical, neuropsychological, and neuroimaging variables to identify associated neural patterns to develop therapeutic protocols for many diseases. The findings will also provide evidence for future research supporting the use of nasya karma as a practical and noninvasive therapeutic modality for treating cerebrovascular, behavioral, and neurological disorders as indicated in Ayurveda. The study will propel innovative research focusing on the neural mechanisms responsible for the delivery of central nervous system therapeutics to the brain, thereby bypassing the blood-brain barrier and yielding favorable outcomes in central nervous system diseases.

TRIAL REGISTRATION: Clinical Trials Registry - India CTRI/2023/06/054219; hhttps://ctri.nic.in/Clinicaltrials/pmaindet2.php?EncHid=ODQ1OTU=&Enc=&userName=.

INTERNATIONAL REGISTERED REPORT IDENTIFIER (IRRID): DERR1-10.2196/67132.

PMID:41511827 | DOI:10.2196/67132

Hemispheric Network Dynamics During Auditory Language Comprehension and Its Clinical Implications Regarding Resting-State Functional Magnetic Resonance Imaging

Fri, 01/09/2026 - 19:00

J Speech Lang Hear Res. 2026 Jan 9:1-17. doi: 10.1044/2025_JSLHR-25-00053. Online ahead of print.

ABSTRACT

PURPOSE: With growing interest in modeling neurobehavior, there is increased interest in understanding patterns of functional connectivity (FC) during language processing. Previous research has suggested that static resting-state functional magnetic resonance imaging (rs-fMRI) and task-based functional magnetic resonance imaging (tb-fMRI) may be interchangeable in determining FC in language-related regions of interest. Authors have argued for the elimination of using tb-fMRI assessments in preoperative clinical workup of language mapping. However, given that language exhibits not only 3D spatial attributes but also temporal components, understanding the temporal dynamics is essential in developing adaptive computational models. Thus, the stability of language neural networks during rs-fMRI and tb-fMRI during auditory comprehension was examined in healthy participants.

METHOD: Twenty-three participants underwent rs-fMRI and 12 participants underwent tb-fMRI while listening to an auditory description task. Sliding scale time series correlation was used to generate estimates of dynamic FC. We used Spearman correlation with Bonferroni correction to compute statistically significant whole-brain dynamic networks. A total of 59,831 data points (42,159 in rs-fMRI, 10,152 in tb-fMRI, and 7,520 in overlap) were analyzed.

RESULTS: There was more notable fluctuation in linear correlation over time for dynamic FC networks activated during the task relative to baseline than during rs-fMRI. Differences in dynamic FC were noted in only specific common networks in the left hemisphere during tb-fMRI.

CONCLUSIONS: The temporal dynamics of identical neural networks during rs-fMRI and tb-fMRI are markedly different, especially within the left hemisphere. This may be an important computational model feature that may improve model prediction of clinical outcomes following central nervous system injury.

PMID:41511194 | DOI:10.1044/2025_JSLHR-25-00053